Cytometry

The Cytometry platform was created in 1999 as a research support service within the Germans Trias i Pujol Research Institute, on the Can Ruti campus in Badalona. In addition, it also provides a clinical diagnostic service in Immunology at the Germans Trias i Pujol Hospital and teaches annual training courses in flow cytometry. The platform provides cell separation, analysis and acquisition services in flow analyzer cytometer, consulting and training. Since February 2006, the Cytometry platform has been located on the ground floor of the IGTP’s Mar building. It consists of 64 m2, distributed in an exclusive laboratory for the use of the cell separator and a space dedicated to the flow cytometer analyzers, as well as a computer area for off-line analysis.

Facility

High-Dimensional Spectral Cytometry

High-Dimensional Spectral Cytometry

Aurora 5-laser (Cytek Biosciences)

Configured with five lasers (355, 405, 488, 561 and 640 nm), three scatter parameters and 64 fluorescence channels, Aurora allows high dimensional data with designed panels (40-colors simultaneously and beyond). Equipped with Automatic Micro-sampling System (AMS) for high throughput acquisition with 96-well plates. Data analysis with SpectroFlo software for unmixing spectral raw data.

Flow Cytometer Analysers

Flow Cytometer Analysers

Flow Cytometer LSRFortessa SORP (BD Biociencias)

Equipped with solid state blue laser (488nm), red laser He-Ne (640 nm), violet laser (405 nm) and green laser (532 nm) this machine allows you to work with 18 fluoresences and 2 scatter parameter (FSC and SSC) analysing area, height and width of pulse for each one. Digital system processing system with software FACSDiva. HTS system for acquiring samples in 96 well plates.

Flow Cytometer FACSCanto II (BD Biociencias)

Solid state blue laser (488 nm), red He-Ne laser (633 nm) and violet laser (405 nm). This machine can work with eight fluorescences and two dispersion parameters (FSC and SSC) analysing area, height and width. Digital system processing system with FACSDiva software. This program permits off-line compensation and the configuration of biexponential scales.

Flow Cytometer FACSLyric (BD Biosciences)

Equipped with Solid state red He-Ne laser (633 nm) and violet laser (405 nm), this machine collects 10 parameters (FSC, SSC and 8 fluorescences¡ channels). It has an automatic loader for tubes and plates. It includes volume computation and uses FACSuite software.

Luminex® 200 (Luminex Corp.)

Luminex® 200 System is a flexible analyzer based on the principles of flow cytometry. Luminex® 200 sets the standard for multiplexing and offers the ability to perform up to 100 different tests in a single reaction volume and use either magnetic beads or plain polystyrene beads. The equipment performs higher sample throughput with a 96-well plate read time of only 45 minutes.

Off-line analysis software

Off-line analysis software

Software

FlowJo, BD FACSDiva and CellQuestPro are installed in Apple iMac Intel i7 16 GB RAM with MAC OSX and Windows (XP y 7) systems. Workstation with Windows10.

Cell Sorters

Cell Sorters

The FACSAria II (BD Biociencias) cell separator

Three lasers (405, 488 y 633 nm), 13 fluorescent detectors (13 fluorescent and 2 light scattering). ACDU (Automated Cell Deposition Unit) for sorting different types of well plates and slides. Options installed: aerosol evacuation system (AMO) and refrigerated bath temperature control. Software FACSDiva. Sorting speed >20.000 cells/sec.

Bigfoot Spectral Sorter

The detection system is equipped with 5 lasers (346nm, 405nm, 488nm, 561nm, and 640nm) and a total of 53 detectors, 5 of which are dedicated to FSC and SSC scatter parameterization. It also has light depolarization filters for SSC scatter parameters on the blue laser.

The Bigfoot software allows working in both conventional and spectral modes and is housed within a class II biosafety cabinet with an aerosol extraction system featuring HEPA filters.

The cell sorting module consists of a jet-in air system and is equipped with 70, 100, 120, and 150 micrometer nozzles. Collection can be performed in 1.5mL eppendorf tubes, 5mL tubes, 15mL and 50mL falcon tubes. It is also possible to collect in various types of plates, allowing simultaneous 4-way sorting in a 96-well plate. Both the acquisition and collection ports are independently temperature controlled (4-37°C).

Institutional Contacts / Head of Facilities

DAVID IZQUIERDO
DAVID IZQUIERDOCap dels Serveis Científic-Tècnics
IGTP

Provisional Contacts

David Izquierdo (Responsible) | Email:  DIZQUIERDO@IGTP.CAT  |

CERCA Institutes

Badalona, Spain

1995

IGTP

Owners

Centres CERCA List

Equipments & Services Offered

Cell Separation FACSAria II Cell Separator (BD Biosciences)Three lasers (405, 488 and 633 nm), fifteen detectors (thirteen fluorescences and two light scattering parameters). ACDU (Automated Cell Deposition Unit) for separation into different types of well plates and slides; single cell option. Installed options: aerosol evacuation system (AMO) and temperature control for refrigerated bath. FACSDiva software. Flow cytometers analyzers LSRFortessa SORP Flow Cytometer (BD Biosciences)Equipped with blue solid state laser (488nm), red He-Ne laser (640 nm), violet laser (405 nm) and green laser (532 nm), it allows to work with 18 fluorescences and 2 dispersion parameters (FSC and SSC ), analyzing for each the area, height and width of the electric pulse. Digital signal processing, acquisition and analysis with FACSDiva software. HTS system for the acquisition of samples with 96-well plates. FACSLyric Cell Separator (BD Biosciences)Equipped with solid state blue laser (488nm), red He-Ne laser (633 nm) and violet laser (405 nm), it allows to work with ten fluorescences and two dispersion parameters (FSC and SSC). Digital signal processing system with BD FACSSuite software. Equipped with automated sample loader for 96-well tubes and plates. FACSCanto II Flow Cytometer (BD Biosciences)Equipped with blue solid state laser (488nm), red He-Ne laser (633nm) and violet laser (405nm), it allows to work with eight fluorescences and two dispersion parameters (FSC and SSC). Digital signal processing system with FACSDiva software. Equipped with automated sample charger for tubes (Loader). Luminex® 200 (Luminex Corp.)The Luminex® 200 system is an analyzer based on the principles of flow cytometry. Luminex® 200 sets the standard for multiplexing and offers the ability to perform up to 100 different tests in a single reaction volume and use magnetic or polystyrene beads. It gets great sample performance with a plate reading time of 96 jars of just 45 minutes. Programes per anàlisi off-line Software FlowJo, FACSDiva and CellQuestPro installed on an iMac 27 “Intel i7 16 GB RAM computer with MAC OSX and Windows systems (XP and 7). High dimensional spectral cytometry Aurora 5-laser (Cytek Biosciences) Installed in May 2020, it is configured with five lasers (355, 405, 488, 561 and 640 nm), three scattering parameters and 64 fluorescence channels. The Aurora allows high-dimensional data with designed panels (40 colors simultaneously and beyond). Equipped with an automatic micro-sampling system (AMS) for the acquisition of high performance with 96-well plates. Data analysis with SpectroFlo software to differentiate spectral raw data.

Cell separation Separator flow cytometers (FACSAria II) allow cells to be separated according to parameters previously defined by the operator. To purify different cell populations, flow cytometry is specially designed for applications that require a high purity of collection. The use of multiple fluorochromes simultaneously allows to classify and separate cell subpopulations based on the expression of different cellular properties. The preparation of the cell separation experiment requires a series of steps prior to its performance that must be specified in advance with the head of the Cytometry Platform. Acquisition and analysis with flow analyzer cytometer BD FACSCanto II, BD FACSLyric and BD LSR Fortessa are the analyzing cytometers that the user can use to carry out different studies. These equipments can be used directly by the user, either accrediting experience in the handling of these equipments or by means of a previous course on the part of the personnel of the platform of Cytometry. Additionally, the FACSAria II cell separator can be used as an analyzer cytometer, especially in cases of the need to use more fluorescence detectors. Offline analysis in Mac / Windows environment with FACSDiva and FlowJo software, offline compensation and “Logicle” or toponential scales and ModFit. Training Design of customized courses. Several courses on the fundamentals and applications of flow cytometry are held annually at the IGTP. Consulting The Cytometry platform provides users with a consulting service on issues related to flow cytometry.

Categorització

RIS3CAT domains & other

RIS3CAT Domains
CERCA GINYS Categories

GINYS-IGTP-002

Access procedure & Fares

Open

Institutional Networks