Genomics and transcriptomics platform

The Genomics and Transcriptomics platform is a core facility focused on giving advice, offering specific services in genomics or transcriptomics techniques, and making specific equipment available to researchers and the scientific community.

Main Contacts

Institutional Contacts / Head of Facilities

JC

Javier CrespoDirector de gestión de infraestructuras
Institut de Recerca Sant Pau

Provisional Contacts

Sandra Camino López | Coordinator |  SCamino@santpau.cat  | 935 537 226 |  ORCID  |  PRC Page 

Sandra Camino López |  SCamino@santpau.cat  | 935 537 226 |  ORCID  |  PRC Page 

Javier Crespo | Responsible Supervisor |  jcrespo@santpau.cat 

CERCA Institutes

Barcelona, Spain

1992

Institut de Recerca Sant Pau

Owners

Centres CERCA List

Equipments & Services Offered

Specific Equipment Affymetrix GS 3000 System array platform (upgrade 7G). 7900HT Fast Real-Time PCR system (96-well, 384-well, and TLDA blocs) (AB-ThermoFisher Sci) Bioanalyzer 2100 (Agilent Tech). Nanodrop 2000 (ThermoFisher Sci). Qubit 3.0 (ThermoFisher Sci) Infinite M200 PRO (Tecan) microplate reader: spectrophotometer, fluorimeter, luminometer. 3130xl Genetic Analyzer capillary electrophoresis sequencer (ThermoFisher Sci). Ion GeneStudio S5 Next-Generation Sequencing System, with Ion Chef System (ThermoFisher Sci).

Specifically, GT Platform offers the following services: Quantitation and quality control of nucleic acid samples (Qubit 3.0, Nanodrop 2000, and Bioanalyzer 2100) Sample processing for Microarrays studies (Gene expression, miRNA profiles, Cytogenetics, GWAS) Real-time PCR projects (Gene expression, miRNA detection, allelic discrimination, CNV, absolute quantification….) Next-Generation Sequencing: exome sequencing, targeted RNA or DNA sequencing (Ampli-Seq technology), small RNA sequencing, de novo sequencing, ChiP-Seq, 16S sequencing, metagenomics… Sanger Sequencing: DNA sequencing, mutation and polymorphism analysis, DNA methylation studies, microorganisms identification… Fragment analysis: cell line authentication, copy number (MLPA), LOH, genotyping studies, microsatellites instability, DNA repeat expansion studies…. Omics Data analysis Some of the equipment used to carry out these techniques can be accessible for researchers after specific user training.

Categorització

RIS3CAT domains & other

RIS3CAT Domains
CERCA GINYS Categories

GINYS-IRSP-005

Access procedure & Fares

Open. Consult the conditions