SLN - Super resolution Light Microscopy and nanoscopy facility

The Super-resolution Light Microscopy & Nanoscopy (SLN) Research Facility at ICFO is equipped with front-end microscopy techniques that are able to operate a step beyond the commercial state of the art.The SLN research team performs continuous R&D in most of the advanced light microscopy techniques and provide access and training to all types of users in the forefront of microscopy for the most demanding biomedical applications. The SLN is open to external collaborations with industry, hospitals, research centers and Universities.The SLN Facility at ICFO provides:Access to external researchers and collaborators to the variety of state-of-the-art microscopy and super resolution techniques.Training, through short-term and mid-term, hands-on courses tailored to the needs of specific users with a variety of relevant backgrounds.Image analysis and quantification tools customized for the different techniques.

Facility

Leica TCS SP8 STED 3X-FALCON

The Leica TCS SP8 STED 3X-FALCON is based on the TCS SP8 confocal microscope. The STED 3X module allows 3D super-resolution capabilities in 3 optical bands due to its 3 depletion lasers. The FALCON (FAst Lifetime CONtrast) is a fluorescence lifetime imaging microscopy (FLIM) platform fully integrated in the confocal microscope that can deliver video-rate FLIM with pixel-by-pixel quantification.

Leica TCS SP5 STED CW

The Leica TCS SP5 STED CW system is based on the Leica TCS SP5 confocal system. It includes the STED CW module. The HyD detectors operate in photon counting mode providing high sensitivity and detection capabilities.

Multimodal Nikon microscope

This is a multimodal workstation built on top of a commercial inverted microscope. This system contains an external scanning head where different femtosecond lasers are coupled.

Renishaw Raman inVia spectrometer system

This is a confocal InVia Renishaw Raman microscope that includes two excitation lasers: 785nm and 532nm.

Multimodal Digital Scanned Light Sheet Microscopy (mDSLM)

The multimodal SPIM/DSLM system is a custom-made microscope designed to explore large microscopic 3D samples such as organoids or small embryos.

N-STORM

Based in a TIRF configuration with 4 colors laser bench. The focusing position stability is given by the Perfect Focus System and it is fully motorized.

Abberior STED Microscope

Our Abberior STED microscope is based on the INFINITY platform, which is built around an Olympus IX83 microscope. The system is equipped with four pulsed lasers as well as a CW 405nm laser.

Training

We collaborate with industry, hospitals and research centres and we provide training through short and mid-term hands-on courses which can be tailored to accommodate any user needs and backgrounds.

Teaching:

  • Erasmus Joint Doctorate program. EUROPHOTONICS EMJD

Main Contacts

MM

Maria MarsalStaff Researcher at the Super Resolution light microscopy and nanoscopy lab ICFO
Institut de Ciències Fotòniques (ICFO)

Institutional Contacts / Head of Facilities

Provisional Contacts

Dr. Pablo Loza-Alvarez | SLN Head |  pablo.loza@icfo.eu  | 93 553 4068 - 93 554 2259 |  ORCID 

SLN Head

Dr. Pablo Loza-Alvarez |  pablo.loza@icfo.eu  | 93 553 4068 - 93 554 2259 |  ORCID 

SLN staff

Dr. Jordi Andilla |  jordi.andilla@icfo.eu  | 93 553 4038 - 93 553 4068 - 93 554 2259 |  ORCID 

Dr. Mónica Marro Sánchez |  monica.marro@icfo.eu  | 93 553 4038 - 93 553 4068 - 93 554 2259 |  ORCID 

Dr. Pablo Loza-Alvarez | Facilities Coordinator |  pablo.loza@icfo.eu  | 93 553 4068 - 93 554 2259 |  ORCID 

CERCA Institutes

Owners

Centres CERCA List

Equipments & Services Offered

Leica TCS SP8 STED 3X Microscope objectives:  10x, 63x and 100x Excitation wavelengths:  white light laser: 470-670 nm  Semiconductor: 405 nm  8 simultaneous excitation laser lines STED lasers:  592nm, 660nm, 775nm Detectors:  2 Backwards HyD’s  1 Forward PMT  2 Backwards PMT’s Scanning mirrors:  Galvanometric  Resonant Leica TCS SP5 STED CW Microscope objectives:  10x, 20x, 40x, 63x and 100x Excitation wavelengths:  Argon laser: 458, 476, 488, 496, 514 nm  HeNe laser: 543, 633 nm  Ti:Sapphire laser: 750-850nm, pulses duration: 120fs, repetition rate 76MHz STED lasers:  592nm, CW Detectors:  2 Backwards HyD’s  1 Forward PMT  3 Backwards PMT’s  2 Backwards APD’s Scanning mirrors:  Galvanometric  Resonant Abberior Infinity Microscope objectives  60x, WD: 0.15 mm, NA=1.42  10x, NA 0.4 air  40x, WD: 0,18 mm, NA=0.95, variable cover glass correction ring  60x silicone oil, WD: 0.3 mm, NA=1.3, variable cover glass correction ring  40X, WD: 0.15 mm, NA=1.3 oil  Universal Plan Extended Apochromat oil immersion objective with 40x magnification  60x, WD: 0.28 mm, NA = 1.2 water Excitation wavelengths:  Laser Module 405 nm (cw)  Laser Module 485 nm (pulsed, picosecond)  Laser Module 518 nm, (Pulsed, picosecond)  Laser Module 561 nm (pulsed, picosecond)  Laser Module 640 nm (pulsed) STED lasers:  775nm (high-power) and at 595nm Detectors:  Spectral detection modules detector   2 single-photon-counting APD modules   2 single-photon-counting optimized for FLIM detection   APD Array detector Scanning mirrors:  QUAD Beam Scanner: 4 galvo scanners and 4 galvo servo controllers Nikon Confocal C1-Si Microscope objectives:  for confocal/multiphoton: 2x, 10x, 20x, 40x, 60x and 100x  specialized for multiphoton (water inmmersion): Olympus 25x , 1.05 NA and Nikon 25x, 1.10 NA Excitation wavelengths:  Argon laser: 457, 477, 488, 514nm  Diode lasers 405, 561, 635nm  Ti:sapphire 750-850nm  Femtosecond pulsed fiber laser 1550nm  OPO: 1650nm-1750nm Detectors:  1 Forward multiphoton PMT, Large area IR Photodiode, Vis. photodiode  2 Backwards multiphoton PMT’s  2 Backwards confocal PMT’s and 32 spectral detectors Scanning mirrors:  Galvanometric Renishaw InVia Raman micro-spectrometer Microscope objectives:  5x, 20x long working distance, 20x, 50x and 100x Excitation wavelengths:  785nm 300mW  532nm 100mW Light Sheet Fluorescence Microscopes (4 different systems) Microscope objectives:  for excitation: 10X, 0.3 NA and 10X, 0.45 NA  for collection (water inmmersion): 20X, 0.5 NA and 25X, 1.05 NA Excitation wavelengths:  Diode lasers 405nm, 488nm, 638nm  DPSS laser 532nm, 651nm  Ti:Sapphire 750-850nm  Femtosecond fiber laser 1030nm Detectors:  Hamamatsu Orca R2  Hamamatsu Orca Flash 4 Nikon N-STORM microscope Microscope objectives:  10x, 40x, 60x and 100x Excitation wavelengths:  405, 488, 561, 647 nm Detectors  Camera: EMCCD IXON 897

The SLN Facility at ICFO provides: Stimulated emission depletion microscopy: Our STED systems allows 3D super-resolution capabilities in up to 3 optical bands (up to 3 depletion lasers). The single molecule detector (SMD HyD) provides a high detection efficiency. Resonant scanners provide fast scanning capabilities up to videorate at 512×512 pixels. The system includes a white light laser source as well as a 405 nm semiconductor laser. Techniques: STED 3D and 3 colors, Confocal, FLIM, Full-hyper spectral (6D) laser scanning confocal, tau-STED, RESCUE, DYMIN, MINFIELD, easy3D Multimodal microscopy: Our multimodal workstation is built on top of a commercial Nikon Confocal C1-Si. This system contains an additional scanning head and a double filter turret from where a MIRA 900F Ti:Sapphire fs laser is coupled. This allows the simultaneous implementation of multiphoton imaging techniques such as TPEF, SHG/PSHG, THG, as well as the possibility for performing laser surgery or optical tweezers.Techniques: Confocal, hyperspectral confocal, TPEF, 3PEF, SHG, PSHG, THG, Femtosecod nanosurgery,optical tweezers Raman micro-spectrometer: Our Raman microscope includes two excitation lasers: 785nm and 514nm. The system is fully automatized and allows switching the excitation light and adjust the laser power by using the software Wire. The system includes the capability of auto-alignment and line streaming.Techniques: Confocal Raman spectroscopy, Surface Enhanced Raman Spectroscopy Light sheet microscopy: Our LSFM systems are custom-made microscopes designed to explore large microscopic 3D samples like organoids or small embryos. They are highly versatile and can be used for adressing diverse biological questions thanks to its modular fashion. They can be set to work with Gaussian and Bessel beams in the linear and non-linear regime. Volumetric images up to 50 vols/s can be achieved.Techniques: TPEF, Digital Scanned Light Sheet Microscopy, Confocal Line Scan, fast volumetric imaging, optical clearing, high throughput, ultramicroscopy. Stochastic optical reconstruction microscopy: Our STORM system is based in a TIRF configuration with 4 colors laser bench. The focusing position stability is given by the Perfect Focus System and it is fully motorized. Multicolor Single Molecule Localization acquisitions can be obtained by using the high sensitivity of the EMCCD and 3D Localisation is obtained by introducing the cylindrical lens.Techniques: STORM, PALM, SPT, dSTORM.

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