Spatial omics platform | Comunitats I-CERCA

Spatial omics platform

The Spatial Omics Platform is an interdisciplinary, cross-facility initiative that integrates histopathology, spatial transcriptomics, spatial proteomics, advanced digital microscopy, and biostatistics to deliver high-resolution, spatially resolved molecular data. The platform enables precise localization and quantification of genes, proteins, and other biomolecules within intact tissues. This collaborative framework supports comprehensive studies of tissue architecture and cellular microenvironment, driving breakthroughs in complex biological systems and disease research.

Facility

Leica Bond RX - Leica

Nanozoomer 2.0HT - Hamamatsu

Phenoigamer - Akoya

Laser Microdissector - Leica

CallenOne - Cellenion

Xenium - 10x Genomics

MGI DNB-seq G400 Sequencer

NeoFlex TOF TOF - Bruker

TIMSTOF Ultra 2 - Bruker attached to Evosep One

Provisional Contacts

Main Contact(s) of Facility

Staff

CERCA Institutes

Barcelona, Spain

2005

Institut de Recerca Biomèdica (IRB Barcelona)

Owners

Centres CERCA List

Address

Link

https://www.irbbarcelona.org/ca/research/spatial-omics-platform

Equipments & Services Offered

Equipments

Leica Bond RX - Leica Nanozoomer 2.0HT – Hamamatsu PhenoImager- Akoya Laser Microdissector - Leica CallenOne - Cellenion Xenium - 10x Genomics MGI DNB-seq G400 Sequencer NeoFlex TOF TOF - Bruker TIMSTOF Ultra 2 - Bruker attached to Evosep One

Services

Please contact spatialomics@irbbarcelona.org to obtain more details and to start discussing and planning your projects. Support in experimental design Sample preparation Spatial genomics analysis -Targeted imaging based (Xenium) -Untargeted sequencing based (Stereo-seq): available soon Spatial proteomics analysis -Maldi-imaging analysis: available soon -Single cell proteomics -Deep Visual proteomics: available soon -Multiplexing IHC/IF Data analysis

Categorització

RIS3CAT domains & other

Domains

CERCA GINYS Categories

CERCAGINYS code

GINYS-IRB-009

Access procedure & Fares

Access procedure

Free

Availability

Institutional Quality

HRS4R

Human Resource Strategy for Researchers It supports research institutions and funding organizations in implementing the Charter and Code in their policies and practices. The implementation of the Charter and Code principles by research institutions makes them more attractive to researchers looking for a new employer or host for their research project..

Roger CabezasUnitat de TransferènciaI-CERCA

CERCA GINYS Quality

Code of Conduct CERCA

The CERCA Code of Conduct, aligned with the European Code of Conduct for Research Integrity, recognized by the European institutions, provides guarantees in terms of transparency, open access to data and results, industrial property management, scientific integrity and relationship with the media, among others.

Roger CabezasUnitat de TransferènciaI-CERCA

CERCA GINYS Quality